Class: Bio::Fastq::FormatData::FASTQ_SOLEXA

Inherits:
Bio::Fastq::FormatData show all
Includes:
Sequence::QualityScore::Solexa, Singleton
Defined in:
lib/bio/db/fastq.rb

Overview

Format information for “fastq-solexa” Bio::Fastq internal use only.

Constant Summary

NAME =

format name

'fastq-solexa'.freeze
OFFSET =

offset

64
SCORE_RANGE =

score range

(-5)..62

Instance Attribute Summary

Attributes inherited from Bio::Fastq::FormatData

#name, #offset, #quality_score_type, #score_range, #symbol

Method Summary

Methods included from Sequence::QualityScore::Solexa

convert_scores_to_phred, p2q, q2p, #quality_score_type, #solexa_p2q, #solexa_q2p

Methods included from Sequence::QualityScore::Converter

#convert_nothing, #convert_scores_from_phred_to_solexa, #convert_scores_from_solexa_to_phred

Methods inherited from Bio::Fastq::FormatData

#initialize, #scores2str, #str2scores

Constructor Details

This class inherits a constructor from Bio::Fastq::FormatData