Class: Species

Inherits:
Taxon
  • Object
show all
Defined in:
app/models/species.rb

Class Method Summary (collapse)

Instance Method Summary (collapse)

Methods inherited from Taxon

#available?, #convert_asterisks_to_daggers!, #current_valid_name, #excluded?, find_genus_group_by_name, find_name, get_statistics, #get_statistics, #homonym?, #homonym_replaced_by?, #incertae_sedis_in?, #invalid?, massage_count, #rank, statistics, #synonym?, #synonym_of?, #unavailable?, #unidentifiable?, #unresolved_homonym?

Class Method Details

+ (Object) create_from_fixup(attributes) 



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# File 'app/models/species.rb', line 33

def self.create_from_fixup attributes
  name = attributes[:name]
  fossil = attributes[:fossil] || false

  parts = name.split ' '
  case parts.size
  when 3
    genus_name = parts[0]
    subgenus_epithet = parts[1].gsub(/\(\)/, '')
    species_epithet = parts[2]
  when 2
    genus_name = parts[0]
    species_epithet = parts[1]
  end

  if attributes[:genus_id]
    taxon = Genus.find attributes[:genus_id]
    genus = taxon
  elsif attributes[:subgenus_id]
    taxon = Subgenus.find attributes[:subgenus_id]
    genus = taxon.genus
  else raise
  end

  species_attributes = {genus: genus, name: species_epithet, status: 'valid', fossil: fossil}
  species_attributes[:subgenus_id] = attributes[:subgenus_id] if attributes[:subgenus_id]

  if attributes[:genus_id]
    species = Species.find_by_name_and_genus_id  species_attributes[:name], taxon.id
  elsif attributes[:subgenus_id]
    species = Species.find_by_name_and_subgenus_id  species_attributes[:name], taxon.id
  else raise
  end

  unless species
    species = Species.create! species_attributes
    Progress.log "FIXUP created species #{species.full_name}"
  end

  species
end

Instance Method Details

- (Object) children 



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# File 'app/models/species.rb', line 13

def children
  subspecies
end

- (Object) full_label 



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# File 'app/models/species.rb', line 21

def full_label
  "<i>#{full_name}</i>"
end

- (Object) full_name 



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# File 'app/models/species.rb', line 17

def full_name
  "#{genus.name} #{name}"
end

- (Object) set_subfamily 



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# File 'app/models/species.rb', line 9

def set_subfamily
  self.subfamily = genus.subfamily if genus
end

- (Object) siblings 



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# File 'app/models/species.rb', line 29

def siblings
  genus.species
end

- (Object) statistics 



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# File 'app/models/species.rb', line 25

def statistics
  get_statistics [:subspecies]
end