The inconsistency between the max summed dissimilarity and the denominator calculation is likely:
- Issue in the complexity index (when present is max, a. ( present - missing ) / max = present/max_similarity - missing/max_dissim
NGS Complexity Index
NOTE: This is a project in progress. This gem will calculate a sequencing complexity index for BAM files.
Add this line to your application's Gemfile:
And then execute:
Or install it yourself as:
$ gem install ngs-ci --pre
Or install manually:
$ git clone https://github.com/MatthewRalston/ngs-ci.git $ cd ngs-ci $ gem build ngs-ci.gemspec $ gem install ngs-ci-[Version].gem
--helpfor details. More to come.
- Fork it ( https://github.com/MatthewRalston/SCI/fork )
- Create your feature branch (
git checkout -b my-new-feature)
- Commit your changes (
git commit -am 'Add some feature')
- Push to the branch (
git push origin my-new-feature)
- Create a new Pull Request
GPL v3. See LICENSE.txt for details.